Primary Literature Publications


111. M.A. Spero and D.K. Newman. (2018) Chlorate specifically targets oxidant-starved, antibiotic-tolerant populations of Pseudomonas aeruginosa biofilms, MBio 9:e01400-18 PMCID: PMC6156191

110. B.J. Belin, E.T. Tookmanian, J. de Anda, G. Wong and D.K. Newman. (2018) Extended hopanoid lipids promote bacterial motility, surface attachment, and root nodule development in the Bradyrhizobium diazoefficiens-Aeschynomene afraspera symbiosis, BioRxiv Paper 423301

109. C. Neubauer, A.S. Kasi, N. Grahl, A.L. Sessions, S.H. Kopf, R. Kato, D.A. Hogan and D.K. Newman. (2018) Refining the application of microbial lipids as tracers of Staphylococcus aureus growth rates in cystic fibrosis sputum, J. Bacteriol. In Press PMID: 30249710


108. L.A. Meirelles and D.K. Newman. (2018) Both toxic and beneficial effects of pyocyanin contribute to the lifecycle of Pseudomonas aeruginosa, Mol. Microbiol. In Press PMID: 30230061

107. C. Neubauer, M.J. Sweredoski, A. Moradian, D.K. Newman, R.J. Robins and J.M. Eiler. (2018) Scanning the isotopic structure of molecules by tandem mass spectrometry, Int. J. Mass Spectrom. In Press

106. N.R. Glasser, P.H. Oyala, T.H. Osborne, J.M. Santini and D.K. Newman. (2018) Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations, Proc. Natl. Acad. Sci. U.S.A. In Press PMID: 30104376


105. K.C. Costa, L.S. Moskatel, L.A. Meirelles and D.K. Newman. (2018) PhdA catalyzes the first step of phenazine-1-carboxylic acid degradation in Mycobacterium fortuitum, J. Bacteriol. 200:e00763-17 PMCID: PMC5915785

104. D.W. Basta, M. Bergkessel and D.K. Newman. (2017) Identification of fitness determinants during energy-limited growth arrest in Pseudomonas aeruginosa, MBio 8:e01170 PMCID: PMC5705914

103. B.M. Babin, L. Atangcho, M.B. van Eldijk, M.J. Sweredoski, A. Moradian, S. Hess, T. Tolker-Nielsen, D.K. Newman and D.A. Tirrell. (2017) Selective proteomic analysis of antibiotic-tolerant cellular subpopulations in Pseudomonas aeruginosa biofilms, MBio 8:e01593-17 PMCID: PMC5654934

102. N.R. Glasser, B.X. Wang, J.A. Hoy and D.K. Newman. (2017) The pyruvate and α-ketoglutarate dehydrogenase complexes of Pseudomonas aeruginosa catalyze pyocyanin and phenazine-1-carboxylic acid reduction via the subunit dihydrolipoamide dehydrogenase, J. Biol. Chem. 292:5593–5607 PMCID: PMC5392700

101. L.R. Racki, E.I. Tocheva, M.G. Dieterle, M.C. Sullivan, G.J. Jensen and D.K. Newman. (2017) Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation in Pseudomonas aeruginosa, Proc. Natl. Acad. Sci. U.S.A. 114:E2440–E2449 PMCID: PMC5373386

100. K.C. Costa, N.R. Glasser, S.J. Conway and D.K. Newman. (2017) Pyocyanin degradation by a tautomerizing demethylase inhibits Pseudomonas aeruginosa biofilms, Science 355:170–173 PMCID: PMC5303695

99. J.N. Ricci, R. Morton, G. Kulkarni, M.L. Summers and D.K. Newman. (2017) Hopanoids play a role in stress tolerance and nutrient storage in the cyanobacterium Nostoc punctiforme, Geobiology 15:173–183 PMID: 27527874

98. H.M.T. Choi, C.R. Calvert, N. Husain, D. Huss, J.C. Barsi, B.E. Deverman, R.C. Hunter, M. Kato, S.M. Lee, A.C.T. Abelin, et al. (2016) Mapping a multiplexed zoo of mRNA expression, Development 143:3632–3637 PMCID: PMC5087610

97. W.H. DePas, R. Starwalt-Lee, L. Van Sambeek, S. Ravindra Kumar, V. Gradinaru and D.K. Newman. (2016) Exposing the three-dimensional biogeography and metabolic states of pathogens in cystic fibrosis sputum via hydrogel embedding, clearing, and rRNA labeling, MBio 7 PMCID: PMC5040109

96. N.J. Shikuma, I. Antoshechkin, J.M. Medeiros, M. Pilhofer and D.K. Newman. (2016) Stepwise metamorphosis of the tubeworm Hydroides elegans is mediated by a bacterial inducer and MAPK signaling, Proc. Natl. Acad. Sci. U.S.A. 113:10097–10102 PMCID: PMC5018781

95. B.M. Babin, M. Bergkessel, M.J. Sweredoski, A. Moradian, S. Hess, D.K. Newman and D.A. Tirrell. (2016) SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa, Proc. Natl. Acad. Sci. U.S.A. 113:E597-605 PMCID: PMC4747698

94. S.H. Kopf, A.L. Sessions, E.S. Cowley, C. Reyes, L. Van Sambeek, Y. Hu, V.J. Orphan, R. Kato and D.K. Newman. (2016) Trace incorporation of heavy water reveals slow and heterogeneous pathogen growth rates in cystic fibrosis sputum, Proc. Natl. Acad. Sci. U.S.A. 113:E110-116 PMCID: PMC4720290

93. R.M. Mariita, S. Bhatnagar, K. Hanselmann, M.J. Hossain, J. Korlach, M. Boitano, R.J. Roberts, M.R. Liles, A.G. Moss, J.R. Leadbetter, et al. (2015) Complete genome sequence of Streptomyces sp. strain CCM_MD2014, isolated from topsoil in Woods Hole, Massachusetts, Genome Announc. 3:e01506-15 PMCID: PMC4698389

92. R.M. Mariita, S. Bhatnagar, K. Hanselmann, M.J. Hossain, J. Korlach, M. Boitano, R.J. Roberts, M.R. Liles, A.G. Moss, J.R. Leadbetter, et al. (2015) Complete genome sequence of Curtobacterium sp. strain MR_MD2014, isolated from topsoil in Woods Hole, Massachusetts, Genome Announc. 3:e01504-15 PMCID: PMC4698388

91. N.N. Kreamer, R. Phillips, D.K. Newman and J.Q. Boedicker. (2015) Predicting the impact of promoter variability on regulatory outputs, Sci. Rep. 5:18238 PMCID: PMC4682146

90. K.C. Costa, M. Bergkessel, S. Saunders, J. Korlach and D.K. Newman. (2015) Enzymatic degradation of phenazines can generate energy and protect sensitive organisms from toxicity, MBio 6:e01520-01515 PMCID: PMC4626857

89. G. Kulkarni, N. Busset, A. Molinaro, D. Gargani, C. Chaintreuil, A. Silipo, E. Giraud and D.K. Newman. (2015) Specific hopanoid classes differentially affect free-living and symbiotic states of Bradyrhizobium diazoefficiens, MBio 6:e01251-01215 PMCID: PMC4620461

88. C. Neubauer, N.F. Dalleska, E.S. Cowley, N.J. Shikuma, C.-H. Wu, A.L. Sessions and D.K. Newman. (2015) Lipid remodeling in Rhodopseudomonas palustris TIE-1 upon loss of hopanoids and hopanoid methylation, Geobiology 13:443–453 PMID: 25923996

87. E.S. Cowley, S.H. Kopf, A. LaRiviere, W. Ziebis and D.K. Newman. (2015) Pediatric cystic fibrosis sputum can be chemically dynamic, anoxic, and extremely reduced due to hydrogen sulfide formation, MBio 6:e00767 PMCID: PMC4551978

86. C.-H. Wu, L. Kong, M. Bialecka-Fornal, S. Park, A.L. Thompson, G. Kulkarni, S.J. Conway and D.K. Newman. (2015) Quantitative hopanoid analysis enables robust pattern detection and comparison between laboratories, Geobiology 13:391–407 PMCID: PMC4676935

85. S.H. Kopf, S.E. McGlynn, A. Green-Saxena, Y. Guan, D.K. Newman and V.J. Orphan. (2015) Heavy water and 15N labelling with NanoSIMS analysis reveals growth rate-dependent metabolic heterogeneity in chemostats, Environ. Microbiol. 17:2542–2556 PMCID: PMC4587896

84. J.N. Ricci, A.J. Michel and D.K. Newman. (2015) Phylogenetic analysis of HpnP reveals the origin of 2-methylhopanoid production in Alphaproteobacteria, Geobiology 13:267–277 PMID: 25630231

83. L. Van Sambeek, E.S. Cowley, D.K. Newman and R. Kato. (2015) Sputum glucose and glycemic control in cystic fibrosis-related diabetes: a cross-sectional study, PLoS ONE 10:e0119938 PMCID: PMC4372582

82. N.N. Kreamer, F. Costa and D.K. Newman. (2015) The ferrous iron-responsive BqsRS two-component system activates genes that promote cationic stress tolerance, MBio 6:e02549 PMCID: PMC4358008

81. C.-H. Wu, M. Bialecka-Fornal and D.K. Newman. (2015) Methylation at the C-2 position of hopanoids increases rigidity in native bacterial membranes, Elife 4 PMCID: PMC4337730

80. A. Silipo, G. Vitiello, D. Gully, L. Sturiale, C. Chaintreuil, J. Fardoux, D. Gargani, H.-I. Lee, G. Kulkarni, N. Busset, et al. (2014) Covalently linked hopanoid-lipid A improves outer-membrane resistance of a Bradyrhizobium symbiont of legumes, Nat. Commun. 5:5106 PMID: 25355435

79. E.P. Fox, E.S. Cowley, C.J. Nobile, N. Hartooni, D.K. Newman and A.D. Johnson. (2014) Anaerobic bacteria grow within Candida albicans biofilms and induce biofilm formation in suspension cultures, Curr. Biol. 24:2411–2416 PMCID: PMC4252622

78. R.J. Malott, C.-H. Wu, T.D. Lee, T.J. Hird, N.F. Dalleska, J.E.A. Zlosnik, D.K. Newman and D.P. Speert. (2014) Fosmidomycin decreases membrane hopanoids and potentiates the effects of colistin on Burkholderia multivorans clinical isolates, Antimicrob. Agents Chemother. 58:5211–5219 PMCID: PMC4135860

77. N.R. Glasser, S.E. Kern and D.K. Newman. (2014) Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force, Mol. Microbiol. 92:399–412 PMCID: PMC4046897

76. J.N. Ricci, M.L. Coleman, P.V. Welander, A.L. Sessions, R.E. Summons, J.R. Spear and D.K. Newman. (2014) Diverse capacity for 2-methylhopanoid production correlates with a specific ecological niche, ISME J. 8:675–684 PMCID: PMC3930323

75. L.J. Bird, I.H. Saralva, S. Park, E.O. Calçada, C.A. Salgueiro, W. Nitschke, R.O. Louro and D.K. Newman. (2014) Nonredundant roles for cytochrome c2 and two high-potential iron-sulfur proteins in the photoferrotroph Rhodopseudomonas palustris TIE-1, J. Bacteriol. 196:850–858

74. N.J. Shikuma, M. Pilhofer, G.L. Weiss, M.G. Hadfield, G.J. Jensen and D.K. Newman. (2014) Marine tubeworm metamorphosis induced by arrays of bacterial phage tail-like structures, Science 343:529–533 PMCID: PMC4949041

73. D.M. Doughty, M. Dieterle, A.L. Sessions, W.W. Fischer and D.K. Newman. (2014) Probing the subcellular localization of hopanoid lipids in bacteria using NanoSIMS, PLoS ONE 9:e84455 PMCID: PMC3883690

72. I. Olovnikov, K. Chan, R. Sachidanandam, D.K. Newman and A.A. Aravin. (2013) Bacterial argonaute samples the transcriptome to identify foreign DNA, Mol. Cell 51:594–605 PMCID: PMC3809076

71. R.C. Hunter, F. Asfour, J. Dingemans, B.L. Osuna, T. Samad, A. Malfroot, P. Cornelis and D.K. Newman. (2013) Ferrous iron is a significant component of bioavailable iron in cystic fibrosis airways, MBio 4:e00557-13 PMCID: PMC3753050

70. G. Kulkarni, C.-H. Wu and D.K. Newman. (2013) The general stress response factor EcfG regulates expression of the C-2 hopanoid methylase HpnP in Rhodopseudomonas palustris TIE-1, J. Bacteriol. 195:2490–2498 PMCID: PMC3676068

69. L.J. Bird, M.L. Coleman and D.K. Newman. (2013) Iron and copper act synergistically to delay anaerobic growth of bacteria, Appl. Environ. Microbiol. 79:3619–3627 PMCID: PMC3675935

68. L.E.P. Dietrich, C. Okegbe, A. Price-Whelan, H. Sakhtah, R.C. Hunter and D.K. Newman. (2013) Bacterial community morphogenesis is intimately linked to the intracellular redox state, J. Bacteriol. 195:1371–1380 PMCID: PMC3624522

67. S.H. Kopf, C. Henny and D.K. Newman. (2013) Ligand-enhanced abiotic iron oxidation and the effects of chemical versus biological iron cycling in anoxic environments, Environ. Sci. Technol. 47:2602–2611 PMCID: PMC3604861

66. A.L. Sessions, L. Zhang, P.V. Welander, D. Doughty, R.E. Summons and D.K. Newman. (2013) Identification and quantification of polyfunctionalized hopanoids by high temperature gas chromatography-mass spectrometry, Org. Geochem. 56:120–130 PMCID: PMC3780965

65. R.C. Hunter, V. Klepac-Ceraj, M.M. Lorenzi, H. Grotzinger, T.R. Martin and D.K. Newman. (2012) Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity, Am. J. Respir. Cell Mol. Biol. 47:738–745 PMID: 22865623

64. L. Pereira, I.H. Saraiva, R. Coelho, D.K. Newman, R.O. Louro and C. Frazão. (2012) Crystallization and preliminary crystallographic studies of FoxE from Rhodobacter ferrooxidans SW2, an FeII oxidoreductase involved in photoferrotrophy, Acta Crystallogr., Sect. F: Struct. Biol. Commun. 68:1106–1108

63. I.H. Saraiva, D.K. Newman and R.O. Louro. (2012) Functional characterization of the FoxE iron oxidoreductase from the photoferrotroph Rhodobacter ferrooxidans SW2, J. Biol. Chem. 287:25541–25548 PMCID: PMC3408196

62. S.H. Kopf and D.K. Newman. (2012) Photomixotrophic growth of Rhodobacter capsulatus SB1003 on ferrous iron, Geobiology 10:216–222 PMCID: PMC4587904

61. P.V. Welander, D.M. Doughty, C.-H. Wu, S. Mehay, R.E. Summons and D.K. Newman. (2012) Identification and characterization of Rhodopseudomonas palustris TIE-1 hopanoid biosynthesis mutants, Geobiology 10:163–177 PMCID: PMC3553210

60. N.N.K. Kreamer, J.C. Wilks, J.J. Marlow, M.L. Coleman and D.K. Newman. (2012) BqsR/BqsS constitute a two-component system that senses extracellular Fe(II) in Pseudomonas aeruginosa, J. Bacteriol. 194:1195–1204 PMCID: PMC3294787

59. D.M. Doughty, M.L. Coleman, R.C. Hunter, A.L. Sessions, R.E. Summons and D.K. Newman. (2011) The RND-family transporter, HpnN, is required for hopanoid localization to the outer membrane of Rhodopseudomonas palustris TIE-1, Proc. Natl. Acad. Sci. U.S.A. 108:E1045-1051 PMCID: PMC3215060

58. N.L. Sullivan, D.S. Tzeranis, Y. Wang, P.T.C. So and D. Newman. (2011) Quantifying the dynamics of bacterial secondary metabolites by spectral multiphoton microscopy, ACS Chem. Biol. 6:893–899 PMCID: PMC3212935

57. J.R. Waldbauer, D.K. Newman and R.E. Summons. (2011) Microaerobic steroid biosynthesis and the molecular fossil record of Archean life, Proc. Natl. Acad. Sci. U.S.A. 108:13409–13414 PMCID: PMC3158215

56. K.C. Reddy, R.C. Hunter, N. Bhatla, D.K. Newman and D.H. Kim. (2011) Caenorhabditis elegans NPR-1-mediated behaviors are suppressed in the presence of mucoid bacteria, Proc. Natl. Acad. Sci. U.S.A. 108:12887–12892 PMCID: PMC3150904

55. Y. Wang, J.C. Wilks, T. Danhorn, I. Ramos, L. Croal and D.K. Newman. (2011) Phenazine-1-carboxylic acid promotes bacterial biofilm development via ferrous iron acquisition, J. Bacteriol. 193:3606–3617 PMCID: PMC3133341

54. L.J. Bird, V. Bonnefoy and D.K. Newman. (2011) Bioenergetic challenges of microbial iron metabolisms, Trends Microbiol. 19:330–340 PMID: 21664821

53. A. Bose and D.K. Newman. (2011) Regulation of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas palustris TIE-1 is mediated by the global regulator, FixK, Mol. Microbiol. 79:63–75

52. R.C. Hunter and D.K. Newman. (2010) A putative ABC transporter, hatABCDE, is among molecular determinants of pyomelanin production in Pseudomonas aeruginosa, J. Bacteriol. 192:5962–5971 PMCID: PMC2976449

51. P.V. Welander, M.L. Coleman, A.L. Sessions, R.E. Summons and D.K. Newman. (2010) Identification of a methylase required for 2-methylhopanoid production and implications for the interpretation of sedimentary hopanes, Proc. Natl. Acad. Sci. U.S.A. 107:8537–8542 PMCID: PMC2889317

50. A. Kappler, C.M. Johnson, H.A. Crosby, B.L. Beard and D.K. Newman. (2010) Evidence for equilibrium iron isotope fractionation by nitrate-reducing iron(II)-oxidizing bacteria, Geochim. Cosmochim. Acta 74:2826–2842

49. I. Ramos, L.E.P. Dietrich, A. Price-Whelan and D.K. Newman. (2010) Phenazines affect biofilm formation by Pseudomonas aeruginosa in similar ways at various scales, Res. Microbiol. 161:187–191 PMCID: PMC2886020

48. Y. Wang, S.E. Kern and D.K. Newman. (2010) Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer, J. Bacteriol. 192:365–369 PMCID: PMC2798253

47. D.M. Doughty, R.C. Hunter, R.E. Summons and D.K. Newman. (2009) 2-Methylhopanoids are maximally produced in akinetes of Nostoc punctiforme: geobiological implications, Geobiology 7:524–532

46. A.J. Poulain and D.K. Newman. (2009) Rhodobacter capsulatus catalyzes light-dependent Fe(II) oxidation under anaerobic conditions as a potential detoxification mechanism, Appl. Environ. Microbiol. 75:6639–6646 PMCID: PMC2772431

45. P.V. Welander, R.C. Hunter, L. Zhang, A.L. Sessions, R.E. Summons and D.K. Newman. (2009) Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1, J. Bacteriol. 191:6145–6156 PMCID: PMC2747905

44. A.K. Boal, J.C. Genereux, P.A. Sontz, J.A. Gralnick, D.K. Newman and J.K. Barton. (2009) Redox signaling between DNA repair proteins for efficient lesion detection, Proc. Natl. Acad. Sci. U.S.A. 106:15237–15242 PMCID: PMC2741234

43. L.R. Croal, Y. Jiao, A. Kappler and D.K. Newman. (2009) Phototrophic Fe(II) oxidation in an atmosphere of H2: implications for Archean banded iron formations, Geobiology 7:21–24 PMCID: PMC2763526

42. L.E.P. Dietrich, T.K. Teal, A. Price-Whelan and D.K. Newman. (2008) Redox-active antibiotics control gene expression and community behavior in divergent bacteria, Science 321:1203–1206 PMCID: PMC2745639

41. Y. Wang and D.K. Newman. (2008) Redox reactions of phenazine antibiotics with ferric (hydr)oxides and molecular oxygen, Environ. Sci. Technol. 42:2380–2386

40. A.A. Gorodetsky, L.E.P. Dietrich, P.E. Lee, B. Demple, D.K. Newman and J.K. Barton. (2008) DNA binding shifts the redox potential of the transcription factor SoxR, Proc. Natl. Acad. Sci. U.S.A. 105:3684–3689 PMCID: PMC2268809

39. D. Malasarn, J.R. Keeffe and D.K. Newman. (2008) Characterization of the arsenate respiratory reductase from Shewanella sp. strain ANA-3, J. Bacteriol. 190:135–142 PMCID: PMC2223751

38. N.C. Caiazza, D.P. Lies and D.K. Newman. (2007) Phototrophic Fe(II) oxidation promotes organic carbon acquisition by Rhodobacter capsulatus SB1003, Appl. Environ. Microbiol. 73:6150–6158 PMCID: PMC2074999

37. S.E. Rashby, A.L. Sessions, R.E. Summons and D.K. Newman. (2007) Biosynthesis of 2-methylbacteriohopanepolyols by an anoxygenic phototroph, Proc. Natl. Acad. Sci. U.S.A. 104:15099–15104 PMCID: PMC1986619

36. A. Price-Whelan, L.E.P. Dietrich and D.K. Newman. (2007) Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14, J. Bacteriol. 189:6372–6381 PMCID: PMC1951912

35. T. Bosak, S.E. Greene and D.K. Newman. (2007) A likely role for anoxygenic photosynthetic microbes in the formation of ancient stromatolites, Geobiology 5:119–126 PMCID: PMC2947360

34. Y. Jiao and D.K. Newman. (2007) The pio operon is essential for phototrophic Fe(II) oxidation in Rhodopseudomonas palustris TIE-1, J. Bacteriol. 189:1765–1773

33. L.R. Croal, Y. Jiao and D.K. Newman. (2007) The fox operon from Rhodobacter strain SW2 promotes phototrophic Fe(II) oxidation in Rhodobacter capsulatus SB1003, J. Bacteriol. 189:1774–1782

32. T.K. Teal, D.P. Lies, B.J. Wold and D.K. Newman. (2006) Spatiometabolic stratification of Shewanella oneidensis biofilms, Appl. Environ. Microbiol. 72:7324–7330 PMCID: PMC1636161

31. K.M. Campbell, D. Malasarn, C.W. Saltikov, D.K. Newman and J.G. Hering. (2006) Simultaneous microbial reduction of iron(III) and arsenic(V) in suspensions of hydrous ferric oxide, Environ. Sci. Technol. 40:5950–5955

30. L.E.P. Dietrich, A. Price-Whelan, A. Petersen, M. Whiteley and D.K. Newman. (2006) The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa, Mol. Microbiol. 61:1308–1321 PMID: 16879411

29. J.A. Gralnick, H. Vali, D.P. Lies and D.K. Newman. (2006) Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1, Proc. Natl. Acad. Sci. U.S.A. 103:4669–4674 PMCID: PMC1450229

28. A. Komeili, Z. Li, D.K. Newman and G.J. Jensen. (2006) Magnetosomes are cell membrane invaginations organized by the actin-like protein MamK, Science 311:242–245 PMID: 16373532

27. T.M. Salmassi, J.J. Walker, D.K. Newman, J.R. Leadbetter, N.R. Pace and J.G. Hering. (2006) Community and cultivation analysis of arsenite oxidizing biofilms at Hot Creek, Environ. Microbiol. 8:50–59 PMID: 16343321

26. A.K. Lee, M.G. Buehler and D.K. Newman. (2006) Influence of a dual-species biofilm on the corrosion of mild steel, Corros. Sci. 48:165–178

25. C.W. Saltikov, R.A. Wildman and D.K. Newman. (2005) Expression dynamics of arsenic respiration and detoxification in Shewanella sp. strain ANA-3, J. Bacteriol. 187:7390–7396 PMCID: PMC1272973

24. A. Kappler, C. Pasquero, K.O. Konhauser and D.K. Newman. (2005) Deposition of banded iron formations by anoxygenic phototrophic Fe(II)-oxidizing bacteria, Geology 33:865–868

23. A. Kappler, B. Schink and D.K. Newman. (2005) Fe(III) mineral formation and cell encrustation by the nitrate-dependent Fe(II)-oxidizer strain BoFeN1, Geobiology 3:235–245

22. D.P. Lies, M.E. Hernandez, A. Kappler, R.E. Mielke, J.A. Gralnick and D.K. Newman. (2005) Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms, Appl. Environ. Microbiol. 71:4414–4426 PMCID: PMC1183279

21. Y. Jiao, A. Kappler, L.R. Croal and D.K. Newman. (2005) Isolation and characterization of a genetically tractable photoautotrophic Fe(II)-oxidizing bacterium, Rhodopseudomonas palustris Strain TIE-1, Appl. Environ. Microbiol. 71:4487–4496

20. K.O. Konhauser, D.K. Newman and A. Kappler. (2005) The potential significance of microbial Fe(III) reduction during deposition of Precambrian banded iron formations, Geobiology 3:167–177

19. J.A. Gralnick, C.T. Brown and D.K. Newman. (2005) Anaerobic regulation by an atypical Arc system in Shewanella oneidensis, Mol. Microbiol. 56:1347–1357 PMID: 15882425

18. T. Bosak and D.K. Newman. (2005) Microbial kinetic controls on calcite morphology in supersaturated solutions, J. Sediment. Res. 75:190–199

17. D. Malasarn, C.W. Saltikov, K.M. Campbell, J.M. Santini, J.G. Hering and D.K. Newman. (2004) arrA is a reliable marker for As(V) respiration, Science 306:455–455 PMID: 15486292

16. T. Bosak, V. Souza-Egipsy, F.A. Corsetti and D.K. Newman. (2004) Micrometer-scale porosity as a biosignature in carbonate crusts, Geology 32:781–784

15. T. Bosak, V. Souza-Egipsy and D.K. Newman. (2004) A laboratory model of abiotic peloid formation, Geobiology 2:189–198

14. A. Komeili, H. Vali, T.J. Beveridge and D.K. Newman. (2004) Magnetosome vesicles are present before magnetite formation, and MamA is required for their activation, Proc. Natl. Acad. Sci. U.S.A. 101:3839–3844 PMCID: PMC374331

13. A. Kappler and D.K. Newman. (2004) Formation of Fe(III)-minerals by Fe(II)-oxidizing photoautotrophic bacteria, Geochimica et Cosmochimica Acta 68:1217–1226

12. L.R. Croal, C.M. Johnson, B.L. Beard and D.K. Newman. (2004) Iron isotope fractionation by Fe(II)-oxidizing photoautotrophic bacteria, Geochim. Cosmochim. Acta 68:1227–1242

11. M.E. Hernandez, A. Kappler and D.K. Newman. (2004) Phenazines and other redox-active antibiotics promote microbial mineral reduction, Appl. Environ. Microbiol. 70:921–928 PMCID: PMC348881

10. C.W. Saltikov and D.K. Newman. (2003) Genetic identification of a respiratory arsenate reductase, Proc. Natl. Acad. Sci. U.S.A. 100:10983–10988 PMCID: PMC196913

9. M.G. Buehler, G.M. Kuhlman, N.V. Myung, D. Keymeulen, S.P. Kounaves, D. Newman and D. Lies. (2003) Planar array REDOX cells and pH sensors for ISS water quality and microbe detection, 2003 International Conference On Environmental Systems, SAE, Doc. No. 2003-01-2553, pp. 1–8

8. T. Bosak and D.K. Newman. (2003) Microbial nucleation of calcium carbonate in the Precambrian, Geology 31:577–580

7. C.W. Saltikov, A. Cifuentes, K. Venkateswaran and D.K. Newman. (2003) The ars detoxification aystem is advantageous but not required for As(V) respiration by the genetically tractable Shewanella species strain ANA-3, Appl. Environ. Microbiol. 69:2800–2809 PMCID: PMC154534

6. J.B.H. Shyu, D.P. Lies and D.K. Newman. (2002) Protective role of tolC in efflux of the electron shuttle anthraquinone-2,6-disulfonate, J. Bacteriol. 184:1806–1810 PMCID: PMC134904

5. M. Dubiel, C.H. Hsu, C.C. Chien, F. Mansfeld and D.K. Newman. (2002) Microbial iron respiration can protect steel from corrosion, Appl. Environ. Microbiol. 68:1440–1445 PMCID: PMC123774

4. T.M. Salmassi, K. Venkateswaren, M. Satomi, K.H. Nealson, D.K. Newman and J.G. Hering. (2002) Oxidation of arsenite by Agrobacterium albertimagni, AOL15, sp. nov., isolated from Hot Creek, California, Geomicrobiol. J. 19:53–66

3. D.K. Newman and R. Kolter. (2000) A role for excreted quinones in extracellular electron transfer, Nature 405:94–97 PMID: 10811225

2. D.K. Newman, E.K. Kennedy, J.D. Coates, D. Ahmann, D.J. Ellis, D.R. Lovley and F.M.M. Morel. (1997) Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov, Arch. Microbiol. 168:380–388 PMID: 9325426

1. D.K. Newman, T.J. Beveridge and F.M.M. Morel. (1997) Precipitation of arsenic trisulfide by Desulfotomaculum auripigmentum, Appl. Environ. Microbiol. 63:2022–2028 PMCID: PMC1389166